Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35734.1 | OSY38007.1 | BG845_05826 | BG845_04414 | Dihydroorotase. | Dihydroorotase. | 0.900 |
OSY35734.1 | allB | BG845_05826 | BG845_04020 | Dihydroorotase. | Allantoinase. | 0.900 |
OSY35734.1 | frc_7 | BG845_05826 | BG845_05827 | Dihydroorotase. | Formyl-coenzyme A transferase; Belongs to the CoA-transferase III family. | 0.709 |
OSY35734.1 | gsiA_8 | BG845_05826 | BG845_05828 | Dihydroorotase. | Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. | 0.711 |
OSY35734.1 | oppD_7 | BG845_05826 | BG845_05829 | Dihydroorotase. | Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily. | 0.654 |
OSY35734.1 | pyrB | BG845_05826 | BG845_03711 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.901 |
OSY35734.1 | pyrC | BG845_05826 | BG845_03710 | Dihydroorotase. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.900 |
OSY35734.1 | pyrD | BG845_05826 | BG845_06131 | Dihydroorotase. | Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.900 |
OSY35734.1 | vgb_6 | BG845_05826 | BG845_05825 | Dihydroorotase. | Virginiamycin B lyase. | 0.837 |
OSY35734.1 | xecA1_3 | BG845_05826 | BG845_05824 | Dihydroorotase. | 2-hydroxypropyl-CoM lyase. | 0.773 |
OSY38007.1 | OSY35734.1 | BG845_04414 | BG845_05826 | Dihydroorotase. | Dihydroorotase. | 0.900 |
OSY38007.1 | allB | BG845_04414 | BG845_04020 | Dihydroorotase. | Allantoinase. | 0.900 |
OSY38007.1 | pyrB | BG845_04414 | BG845_03711 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.994 |
OSY38007.1 | pyrC | BG845_04414 | BG845_03710 | Dihydroorotase. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.900 |
OSY38007.1 | pyrD | BG845_04414 | BG845_06131 | Dihydroorotase. | Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.982 |
allB | OSY35734.1 | BG845_04020 | BG845_05826 | Allantoinase. | Dihydroorotase. | 0.900 |
allB | OSY38007.1 | BG845_04020 | BG845_04414 | Allantoinase. | Dihydroorotase. | 0.900 |
allB | pyrB | BG845_04020 | BG845_03711 | Allantoinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
allB | pyrC | BG845_04020 | BG845_03710 | Allantoinase. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.922 |
allB | pyrD | BG845_04020 | BG845_06131 | Allantoinase. | Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.984 |
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