Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35677.1 | OSY35678.1 | BG845_05887 | BG845_05888 | Hypothetical protein. | Hypothetical protein. | 0.841 |
OSY35677.1 | OSY35758.1 | BG845_05887 | BG845_05850 | Hypothetical protein. | Hypothetical protein. | 0.417 |
OSY35677.1 | OSY36930.1 | BG845_05887 | BG845_05013 | Hypothetical protein. | Hypothetical protein. | 0.543 |
OSY35677.1 | aldA_2 | BG845_05887 | BG845_05885 | Hypothetical protein. | Putative aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family. | 0.828 |
OSY35677.1 | catD_5 | BG845_05887 | BG845_05886 | Hypothetical protein. | 3-oxoadipate enol-lactonase 2. | 0.930 |
OSY35677.1 | lcdH_2 | BG845_05887 | BG845_00779 | Hypothetical protein. | L-carnitine dehydrogenase; Overlaps another CDS with the same product name. | 0.420 |
OSY35677.1 | luxA_8 | BG845_05887 | BG845_05149 | Hypothetical protein. | Alkanal monooxygenase alpha chain. | 0.589 |
OSY35677.1 | luxA_9 | BG845_05887 | BG845_05889 | Hypothetical protein. | Alkanal monooxygenase alpha chain. | 0.927 |
OSY35677.1 | opuD_1 | BG845_05887 | BG845_05891 | Hypothetical protein. | Glycine betaine transporter OpuD; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.494 |
OSY35677.1 | ydfH_16 | BG845_05887 | BG845_05890 | Hypothetical protein. | Putative HTH-type transcriptional regulator YdfH. | 0.811 |
OSY35678.1 | OSY35677.1 | BG845_05888 | BG845_05887 | Hypothetical protein. | Hypothetical protein. | 0.841 |
OSY35678.1 | OSY35758.1 | BG845_05888 | BG845_05850 | Hypothetical protein. | Hypothetical protein. | 0.412 |
OSY35678.1 | OSY36930.1 | BG845_05888 | BG845_05013 | Hypothetical protein. | Hypothetical protein. | 0.504 |
OSY35678.1 | aldA_2 | BG845_05888 | BG845_05885 | Hypothetical protein. | Putative aldehyde dehydrogenase AldA; Belongs to the aldehyde dehydrogenase family. | 0.827 |
OSY35678.1 | catD_5 | BG845_05888 | BG845_05886 | Hypothetical protein. | 3-oxoadipate enol-lactonase 2. | 0.930 |
OSY35678.1 | lcdH_2 | BG845_05888 | BG845_00779 | Hypothetical protein. | L-carnitine dehydrogenase; Overlaps another CDS with the same product name. | 0.458 |
OSY35678.1 | luxA_8 | BG845_05888 | BG845_05149 | Hypothetical protein. | Alkanal monooxygenase alpha chain. | 0.617 |
OSY35678.1 | luxA_9 | BG845_05888 | BG845_05889 | Hypothetical protein. | Alkanal monooxygenase alpha chain. | 0.931 |
OSY35678.1 | opuD_1 | BG845_05888 | BG845_05891 | Hypothetical protein. | Glycine betaine transporter OpuD; Belongs to the BCCT transporter (TC 2.A.15) family. | 0.494 |
OSY35678.1 | ydfH_16 | BG845_05888 | BG845_05890 | Hypothetical protein. | Putative HTH-type transcriptional regulator YdfH. | 0.807 |
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