Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OSY34394.1 | yodB_1 | BG845_06899 | BG845_00015 | Hypothetical protein. | HTH-type transcriptional regulator YodB. | 0.412 |
| OSY34394.1 | ytcD_2 | BG845_06899 | BG845_06029 | Hypothetical protein. | Putative HTH-type transcriptional regulator YtcD. | 0.412 |
| OSY35493.1 | clpP | BG845_06031 | BG845_06033 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.556 |
| OSY35493.1 | clpP2_4 | BG845_06031 | BG845_06032 | Hypothetical protein. | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | 0.556 |
| OSY35493.1 | ydbC | BG845_06031 | BG845_06030 | Hypothetical protein. | Putative oxidoreductase YdbC. | 0.773 |
| OSY35493.1 | ytcD_2 | BG845_06031 | BG845_06029 | Hypothetical protein. | Putative HTH-type transcriptional regulator YtcD. | 0.548 |
| OSY40323.1 | hxlR | BG845_02726 | BG845_04036 | PemK-like protein. | HTH-type transcriptional activator HxlR. | 0.421 |
| OSY40323.1 | yodB_1 | BG845_02726 | BG845_00015 | PemK-like protein. | HTH-type transcriptional regulator YodB. | 0.638 |
| OSY40323.1 | yodB_2 | BG845_02726 | BG845_05693 | PemK-like protein. | HTH-type transcriptional regulator YodB. | 0.418 |
| OSY40323.1 | ytcD_2 | BG845_02726 | BG845_06029 | PemK-like protein. | Putative HTH-type transcriptional regulator YtcD. | 0.638 |
| OSY40323.1 | yybR_1 | BG845_02726 | BG845_02479 | PemK-like protein. | Putative HTH-type transcriptional regulator YybR. | 0.421 |
| clpP | OSY35493.1 | BG845_06033 | BG845_06031 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Hypothetical protein. | 0.556 |
| clpP | clpP2_4 | BG845_06033 | BG845_06032 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | 0.981 |
| clpP | ydbC | BG845_06033 | BG845_06030 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Putative oxidoreductase YdbC. | 0.566 |
| clpP | ytcD_2 | BG845_06033 | BG845_06029 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Putative HTH-type transcriptional regulator YtcD. | 0.407 |
| clpP2_4 | OSY35493.1 | BG845_06032 | BG845_06031 | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | Hypothetical protein. | 0.556 |
| clpP2_4 | clpP | BG845_06032 | BG845_06033 | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.981 |
| clpP2_4 | ydbC | BG845_06032 | BG845_06030 | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | Putative oxidoreductase YdbC. | 0.566 |
| clpP2_4 | ytcD_2 | BG845_06032 | BG845_06029 | ATP-dependent Clp protease proteolytic subunit 2; Belongs to the peptidase S14 family. | Putative HTH-type transcriptional regulator YtcD. | 0.407 |
| hxlR | OSY40323.1 | BG845_04036 | BG845_02726 | HTH-type transcriptional activator HxlR. | PemK-like protein. | 0.421 |
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