Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35497.1 | OSY39879.1 | BG845_06035 | BG845_03114 | Hypothetical protein. | Haloalkane dehalogenase. | 0.560 |
OSY35497.1 | OSY42756.1 | BG845_06035 | BG845_00997 | Hypothetical protein. | Hypothetical protein. | 0.441 |
OSY35497.1 | OSY43107.1 | BG845_06035 | BG845_00712 | Hypothetical protein. | OsmC-like protein. | 0.402 |
OSY35497.1 | bphC2 | BG845_06035 | BG845_06684 | Hypothetical protein. | Biphenyl-2,3-diol 1,2-dioxygenase 2. | 0.478 |
OSY35497.1 | clgR_2 | BG845_06035 | BG845_06034 | Hypothetical protein. | Transcriptional regulator ClgR. | 0.515 |
OSY35497.1 | ldi | BG845_06035 | BG845_05095 | Hypothetical protein. | Linalool dehydratase/isomerase precursor. | 0.468 |
OSY39879.1 | OSY35497.1 | BG845_03114 | BG845_06035 | Haloalkane dehalogenase. | Hypothetical protein. | 0.560 |
OSY39879.1 | bphC2 | BG845_03114 | BG845_06684 | Haloalkane dehalogenase. | Biphenyl-2,3-diol 1,2-dioxygenase 2. | 0.752 |
OSY39879.1 | ldi | BG845_03114 | BG845_05095 | Haloalkane dehalogenase. | Linalool dehydratase/isomerase precursor. | 0.673 |
OSY42756.1 | OSY35497.1 | BG845_00997 | BG845_06035 | Hypothetical protein. | Hypothetical protein. | 0.441 |
OSY43107.1 | OSY35497.1 | BG845_00712 | BG845_06035 | OsmC-like protein. | Hypothetical protein. | 0.402 |
bphC2 | OSY35497.1 | BG845_06684 | BG845_06035 | Biphenyl-2,3-diol 1,2-dioxygenase 2. | Hypothetical protein. | 0.478 |
bphC2 | OSY39879.1 | BG845_06684 | BG845_03114 | Biphenyl-2,3-diol 1,2-dioxygenase 2. | Haloalkane dehalogenase. | 0.752 |
bphC2 | ldi | BG845_06684 | BG845_05095 | Biphenyl-2,3-diol 1,2-dioxygenase 2. | Linalool dehydratase/isomerase precursor. | 0.529 |
clgR_2 | OSY35497.1 | BG845_06034 | BG845_06035 | Transcriptional regulator ClgR. | Hypothetical protein. | 0.515 |
ldi | OSY35497.1 | BG845_05095 | BG845_06035 | Linalool dehydratase/isomerase precursor. | Hypothetical protein. | 0.468 |
ldi | OSY39879.1 | BG845_05095 | BG845_03114 | Linalool dehydratase/isomerase precursor. | Haloalkane dehalogenase. | 0.673 |
ldi | bphC2 | BG845_05095 | BG845_06684 | Linalool dehydratase/isomerase precursor. | Biphenyl-2,3-diol 1,2-dioxygenase 2. | 0.529 |