STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY35036.1Putative endopeptidase precursor. (378 aa)    
Predicted Functional Partners:
OSY35037.1
AAA-like domain protein.
 
  
 0.864
OSY35038.1
Hypothetical protein.
 
     0.854
OSY35039.1
TrbL/VirB6 plasmid conjugal transfer protein.
 
   
 0.700
dnaJ_3
Chaperone protein DnaJ.
     
 0.638
OSY35040.1
Hypothetical protein.
       0.621
OSY35041.1
Hypothetical protein.
       0.620
OSY35034.1
Hypothetical protein.
       0.613
OSY35032.1
TraM recognition site of TraD and TraG.
 
     0.612
OSY35043.1
Hypothetical protein.
     
 0.520
OSY35042.1
Hypothetical protein.
       0.509
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.