STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dde_2008PFAM: Heat shock protein Hsp20; KEGG: dvm:DvMF_0311 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family. (143 aa)    
Predicted Functional Partners:
Dde_2007
PFAM: Peptidase S16, lon C-terminal; KEGG: dvm:DvMF_0312 peptidase S16 lon domain protein.
       0.781
Dde_1343
PFAM: Heat shock protein Hsp20; KEGG: dvl:Dvul_0793 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
     0.764
Dde_3092
PFAM: Heat shock protein Hsp20; KEGG: dvm:DvMF_2648 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
     0.764
Dde_1344
PFAM: Heat shock protein Hsp20; KEGG: dvm:DvMF_2959 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
     0.723
Dde_3091
PFAM: Heat shock protein Hsp20; KEGG: dvl:Dvul_2302 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family.
  
     0.610
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.570
Dde_2099
TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: dvm:DvMF_0458 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: ATPase, AAA+ type, core; Belongs to the ClpA/ClpB family.
  
 
 0.570
Dde_3413
KEGG: mfa:Mfla_1170 ATPase AAA-2; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; Belongs to the ClpA/ClpB family.
  
 
 0.570
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.548
Dde_2010
PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dvm:DvMF_0310 PpiC-type peptidyl-prolyl cis-trans isomerase.
 
     0.539
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.