node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dde_0507 | Dde_2011 | Dde_0507 | Dde_2011 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: dvm:DvMF_0309 30S ribosomal protein S1. | 0.916 |
Dde_0507 | Dde_2162 | Dde_0507 | Dde_2162 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | 0.515 |
Dde_0507 | Dde_2342 | Dde_0507 | Dde_2342 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dvu:DVU2144 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.540 |
Dde_0507 | Dde_2418 | Dde_0507 | Dde_2418 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | KEGG: dvl:Dvul_1841 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | 0.515 |
Dde_0507 | Dde_3736 | Dde_0507 | Dde_3736 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dsa:Desal_3742 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.540 |
Dde_0507 | guaA | Dde_0507 | Dde_1470 | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | 0.751 |
Dde_0730 | Dde_2418 | Dde_0730 | Dde_2418 | PFAM: Protein of unknown function DUF214, permase predicted; KEGG: das:Daes_0606 hypothetical protein. | KEGG: dvl:Dvul_1841 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | 0.401 |
Dde_0730 | topA | Dde_0730 | Dde_0106 | PFAM: Protein of unknown function DUF214, permase predicted; KEGG: das:Daes_0606 hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.553 |
Dde_2011 | Dde_0507 | Dde_2011 | Dde_0507 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: dvm:DvMF_0309 30S ribosomal protein S1. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.916 |
Dde_2011 | Dde_2162 | Dde_2011 | Dde_2162 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: dvm:DvMF_0309 30S ribosomal protein S1. | KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | 0.515 |
Dde_2011 | Dde_2342 | Dde_2011 | Dde_2342 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: dvm:DvMF_0309 30S ribosomal protein S1. | SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dvu:DVU2144 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.540 |
Dde_2011 | Dde_2418 | Dde_2011 | Dde_2418 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: dvm:DvMF_0309 30S ribosomal protein S1. | KEGG: dvl:Dvul_1841 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | 0.515 |
Dde_2011 | Dde_3736 | Dde_2011 | Dde_3736 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: dvm:DvMF_0309 30S ribosomal protein S1. | SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dsa:Desal_3742 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.540 |
Dde_2011 | guaA | Dde_2011 | Dde_1470 | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: dvm:DvMF_0309 30S ribosomal protein S1. | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | 0.751 |
Dde_2162 | Dde_0507 | Dde_2162 | Dde_0507 | KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.515 |
Dde_2162 | Dde_2011 | Dde_2162 | Dde_2011 | KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | PFAM: Ribosomal protein S1, RNA binding domain; KEGG: dvm:DvMF_0309 30S ribosomal protein S1. | 0.515 |
Dde_2162 | Dde_2342 | Dde_2162 | Dde_2342 | KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dvu:DVU2144 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.558 |
Dde_2162 | Dde_2418 | Dde_2162 | Dde_2418 | KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | KEGG: dvl:Dvul_1841 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | 0.444 |
Dde_2162 | Dde_3736 | Dde_2162 | Dde_3736 | KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: dsa:Desal_3742 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.558 |
Dde_2162 | guaA | Dde_2162 | Dde_1470 | KEGG: dsa:Desal_2308 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE. | GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP. | 0.412 |