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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Score
Dde_2575KEGG: dvm:DvMF_2903 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB. (394 aa)    
Predicted Functional Partners:
Dde_2578
Putative heme biosynthesis protein; SMART: Transcription regulator, AsnC-type; KEGG: dvl:Dvul_2129 AsnC family transcriptional regulator.
 
 0.992
Dde_3179
Putative heme biosynthesis protein; SMART: Transcription regulator, AsnC-type; KEGG: dvm:DvMF_2503 putative transcriptional regulator, AsnC family.
 
 
 0.986
Dde_2577
KEGG: dvl:Dvul_2128 radical SAM domain-containing protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
 
 
 
0.961
Dde_2576
Porphobilinogen synthase; KEGG: dvu:DVU0856 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; Belongs to the ALAD family.
 
  
 0.692
Dde_2837
TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: dvl:Dvul_2236 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
 
  
 0.669
Dde_3078
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
  
 0.587
Dde_2023
TIGRFAM: Sirohaem synthase, N-terminal; KEGG: dvm:DvMF_0298 siroheme synthase.
 
     0.472
Dde_2573
Lipoprotein; KEGG: dvl:Dvul_2125 lipoprotein.
       0.402
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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