STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dde_2617KEGG: dvl:Dvul_1277 hypothetical protein. (580 aa)    
Predicted Functional Partners:
Dde_0521
KEGG: dvm:DvMF_1550 hypothetical protein.
  
     0.751
Dde_1634
KEGG: dvm:DvMF_0611 hypothetical protein.
 
     0.747
Dde_1974
KEGG: dvm:DvMF_0357 histidine triad (HIT) protein.
  
     0.737
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.732
Dde_0523
KEGG: dvu:DVU0400 hypothetical protein.
  
     0.729
Dde_2966
PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; KEGG: dvm:DvMF_1427 metal dependent phosphohydrolase.
  
   
 0.725
Dde_1035
KEGG: dvm:DvMF_0962 hypothetical protein.
  
     0.718
Dde_0719
PFAM: Putative Fe-S cluster; Molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: dvm:DvMF_1215 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein.
  
     0.709
Dde_2616
KEGG: dvm:DvMF_0579 hypothetical protein.
       0.708
Dde_3184
KEGG: dvl:Dvul_0213 hypothetical protein.
  
     0.691
Your Current Organism:
Desulfovibrio alaskensis
NCBI taxonomy Id: 207559
Other names: D. alaskensis G20, Desulfovibrio alaskensis G20, Desulfovibrio alaskensis str. G20, Desulfovibrio alaskensis strain G20, Desulfovibrio desulfuricans subsp. desulfuricans str. G20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.