Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAT12055.1 | EAT12056.1 | RED65_03415 | RED65_03420 | Hypothetical protein. | Lipoprotein, putative; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | 0.457 |
EAT12056.1 | EAT12055.1 | RED65_03420 | RED65_03415 | Lipoprotein, putative; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | Hypothetical protein. | 0.457 |
EAT12056.1 | EAT12503.1 | RED65_03420 | RED65_06398 | Lipoprotein, putative; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.859 |
EAT12056.1 | EAT13875.1 | RED65_03420 | RED65_10794 | Lipoprotein, putative; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | 0.429 |
EAT12056.1 | EAT13978.1 | RED65_03420 | RED65_11309 | Lipoprotein, putative; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | 0.488 |
EAT12503.1 | EAT12056.1 | RED65_06398 | RED65_03420 | COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Lipoprotein, putative; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | 0.859 |
EAT13875.1 | EAT12056.1 | RED65_10794 | RED65_03420 | COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. | Lipoprotein, putative; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | 0.429 |
EAT13978.1 | EAT12056.1 | RED65_11309 | RED65_03420 | Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | Lipoprotein, putative; COG1305 Transglutaminase-like enzymes, putative cysteine proteases. | 0.488 |