Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CoxB | EAT11247.1 | RED65_16141 | RED65_08324 | Cytochrome-c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | COG2863 Cytochrome c553. | 0.681 |
| CoxB | EAT12190.1 | RED65_16141 | RED65_04170 | Cytochrome-c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | COG3245 Cytochrome c5. | 0.447 |
| CoxB | EAT12191.1 | RED65_16141 | RED65_04175 | Cytochrome-c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Oxidoreductase, FAD-binding protein; COG0277 FAD/FMN-containing dehydrogenases. | 0.461 |
| CoxB | EAT12377.1 | RED65_16141 | RED65_16106 | Cytochrome-c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | 0.914 |
| EAT11247.1 | CoxB | RED65_08324 | RED65_16141 | COG2863 Cytochrome c553. | Cytochrome-c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.681 |
| EAT11247.1 | EAT12190.1 | RED65_08324 | RED65_04170 | COG2863 Cytochrome c553. | COG3245 Cytochrome c5. | 0.544 |
| EAT11247.1 | EAT12377.1 | RED65_08324 | RED65_16106 | COG2863 Cytochrome c553. | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | 0.439 |
| EAT11821.1 | EAT12190.1 | RED65_05524 | RED65_04170 | Hypothetical protein. | COG3245 Cytochrome c5. | 0.489 |
| EAT11858.1 | EAT12190.1 | RED65_13892 | RED65_04170 | Hypothetical protein. | COG3245 Cytochrome c5. | 0.478 |
| EAT12189.1 | EAT12190.1 | RED65_04165 | RED65_04170 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; COG2202 FOG: PAS/PAC domain. | COG3245 Cytochrome c5. | 0.494 |
| EAT12189.1 | EAT12191.1 | RED65_04165 | RED65_04175 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; COG2202 FOG: PAS/PAC domain. | Oxidoreductase, FAD-binding protein; COG0277 FAD/FMN-containing dehydrogenases. | 0.494 |
| EAT12189.1 | EAT12192.1 | RED65_04165 | RED65_04180 | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; COG2202 FOG: PAS/PAC domain. | Alanine racemase-like protein; COG3616 Predicted amino acid aldolase or racemase. | 0.479 |
| EAT12190.1 | CoxB | RED65_04170 | RED65_16141 | COG3245 Cytochrome c5. | Cytochrome-c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.447 |
| EAT12190.1 | EAT11247.1 | RED65_04170 | RED65_08324 | COG3245 Cytochrome c5. | COG2863 Cytochrome c553. | 0.544 |
| EAT12190.1 | EAT11821.1 | RED65_04170 | RED65_05524 | COG3245 Cytochrome c5. | Hypothetical protein. | 0.489 |
| EAT12190.1 | EAT11858.1 | RED65_04170 | RED65_13892 | COG3245 Cytochrome c5. | Hypothetical protein. | 0.478 |
| EAT12190.1 | EAT12189.1 | RED65_04170 | RED65_04165 | COG3245 Cytochrome c5. | Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; COG2202 FOG: PAS/PAC domain. | 0.494 |
| EAT12190.1 | EAT12191.1 | RED65_04170 | RED65_04175 | COG3245 Cytochrome c5. | Oxidoreductase, FAD-binding protein; COG0277 FAD/FMN-containing dehydrogenases. | 0.841 |
| EAT12190.1 | EAT12192.1 | RED65_04170 | RED65_04180 | COG3245 Cytochrome c5. | Alanine racemase-like protein; COG3616 Predicted amino acid aldolase or racemase. | 0.901 |
| EAT12190.1 | EAT12377.1 | RED65_04170 | RED65_16106 | COG3245 Cytochrome c5. | COG1612 Uncharacterized protein required for cytochrome oxidase assembly. | 0.507 |
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