STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT11821.1Hypothetical protein. (455 aa)    
Predicted Functional Partners:
EAT11822.1
COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor.
  
 0.920
EAT13343.1
Hypothetical protein.
 
    0.892
EAT11859.1
ABC-type dipeptide transport system, periplasmic component.
 
    0.892
EAT11823.1
COG1033 Predicted exporters of the RND superfamily.
 
  
 0.886
PepN
COG0308 Aminopeptidase N.
       0.539
EAT11818.1
COG3139 Uncharacterized protein conserved in bacteria.
       0.502
EAT12190.1
COG3245 Cytochrome c5.
  
     0.489
EAT11860.1
Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
    0.485
ppnK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.467
EAT11819.1
Hypothetical protein.
  
    0.455
Your Current Organism:
Bermanella marisrubri
NCBI taxonomy Id: 207949
Other names: B. marisrubri, Bermanella marisrubri Pinhassi et al. 2009, CCUG 52064, CECT 7074, Oceanobacter sp. RED65, strain RED65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.