Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CydC | CydD | RED65_05672 | RED65_05667 | Transport ATP-binding protein CydC; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components. | ABC transporter, ATP-binding and membrane protein; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | 0.999 |
CydC | EAT11381.1 | RED65_05672 | RED65_05677 | Transport ATP-binding protein CydC; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components. | Hypothetical protein. | 0.505 |
CydC | EAT11382.1 | RED65_05672 | RED65_05682 | Transport ATP-binding protein CydC; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components. | Hypothetical protein. | 0.505 |
CydD | CydC | RED65_05667 | RED65_05672 | ABC transporter, ATP-binding and membrane protein; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | Transport ATP-binding protein CydC; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components. | 0.999 |
CydD | EAT11381.1 | RED65_05667 | RED65_05677 | ABC transporter, ATP-binding and membrane protein; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | Hypothetical protein. | 0.518 |
CydD | EAT11382.1 | RED65_05667 | RED65_05682 | ABC transporter, ATP-binding and membrane protein; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | Hypothetical protein. | 0.505 |
EAT11381.1 | CydC | RED65_05677 | RED65_05672 | Hypothetical protein. | Transport ATP-binding protein CydC; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components. | 0.505 |
EAT11381.1 | CydD | RED65_05677 | RED65_05667 | Hypothetical protein. | ABC transporter, ATP-binding and membrane protein; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | 0.518 |
EAT11381.1 | EAT11382.1 | RED65_05677 | RED65_05682 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EAT11382.1 | CydC | RED65_05682 | RED65_05672 | Hypothetical protein. | Transport ATP-binding protein CydC; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components. | 0.505 |
EAT11382.1 | CydD | RED65_05682 | RED65_05667 | Hypothetical protein. | ABC transporter, ATP-binding and membrane protein; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components. | 0.505 |
EAT11382.1 | EAT11381.1 | RED65_05682 | RED65_05677 | Hypothetical protein. | Hypothetical protein. | 0.773 |