STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT11708.1COG0226 ABC-type phosphate transport system, periplasmic component. (139 aa)    
Predicted Functional Partners:
PstA
Phosphate ABC transporter, permease protein PtsA; COG4985 ABC-type phosphate transport system, auxiliary component.
  
  
 0.891
EAT11706.1
Hypothetical protein.
 
    0.890
EAT13519.1
Hypothetical protein.
 
    0.776
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
  
 0.724
EAT11707.1
Hypothetical protein; COG0056 F0F1-type ATP synthase, alpha subunit.
 
    
0.597
EAT12537.1
COG1334 Uncharacterized flagellar protein FlaG.
  
 
   0.594
EAT13337.1
COG0642 Signal transduction histidine kinase.
     
 0.482
PhoU
Phosphate uptake regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
  
  
 0.437
thiE
Hypothetical protein; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
   
  
 0.432
EAT11853.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.428
Your Current Organism:
Bermanella marisrubri
NCBI taxonomy Id: 207949
Other names: B. marisrubri, Bermanella marisrubri Pinhassi et al. 2009, CCUG 52064, CECT 7074, Oceanobacter sp. RED65, strain RED65
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.