STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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cheBResponse regulator receiver (CheY-like) modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (348 aa)    
Predicted Functional Partners:
EAT12552.1
CheA signal transduction histidine kinase; COG0643 Chemotaxis protein histidine kinase and related kinases.
 0.996
EAT12555.1
COG1352 Methylase of chemotaxis methyl-accepting proteins.
  
 0.995
EAT12577.1
Probable two-component sensor; COG0643 Chemotaxis protein histidine kinase and related kinases.
 0.992
EAT13834.1
Aerotaxis receptor Aer-2; COG2202 FOG: PAS/PAC domain.
 0.980
EAT12553.1
CheW protein; COG0835 Chemotaxis signal transduction protein.
 
 
 0.978
cheD
CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
  
 0.978
EAT12607.1
Hypothetical protein; COG2198 FOG: HPt domain.
  
 
 0.976
EAT12554.1
Probable methyl-accepting chemotaxis protein; COG2202 FOG: PAS/PAC domain.
 0.968
EAT12584.1
COG0835 Chemotaxis signal transduction protein.
 
 
 0.961
EAT11223.1
Sensor histidine kinase/response regulator; COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 
0.957
Your Current Organism:
Bermanella marisrubri
NCBI taxonomy Id: 207949
Other names: B. marisrubri, Bermanella marisrubri Pinhassi et al. 2009, CCUG 52064, CECT 7074, Oceanobacter sp. RED65, strain RED65
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