Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAT10774.1 | EAT12009.1 | RED65_03175 | RED65_11730 | COG4206 Outer membrane cobalamin receptor protein. | COG1360 Flagellar motor protein. | 0.419 |
EAT10774.1 | EAT12676.1 | RED65_03175 | RED65_13367 | COG4206 Outer membrane cobalamin receptor protein. | Protein containing QXW lectin repeats. | 0.502 |
EAT10774.1 | EAT12976.1 | RED65_03175 | RED65_14807 | COG4206 Outer membrane cobalamin receptor protein. | Tfp pilus assembly protein tip-associated adhesin PilY1-like. | 0.657 |
EAT10774.1 | EAT13055.1 | RED65_03175 | RED65_15202 | COG4206 Outer membrane cobalamin receptor protein. | OmpA-like transmembrane domain protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.517 |
EAT10774.1 | EAT13279.1 | RED65_03175 | RED65_00925 | COG4206 Outer membrane cobalamin receptor protein. | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | 0.504 |
EAT10774.1 | EAT13812.1 | RED65_03175 | RED65_10479 | COG4206 Outer membrane cobalamin receptor protein. | GluG; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.518 |
EAT10774.1 | FliD | RED65_03175 | RED65_06573 | COG4206 Outer membrane cobalamin receptor protein. | COG1345 Flagellar capping protein. | 0.535 |
EAT11105.1 | EAT12676.1 | RED65_04904 | RED65_13367 | Hypothetical protein. | Protein containing QXW lectin repeats. | 0.710 |
EAT11105.1 | EAT12976.1 | RED65_04904 | RED65_14807 | Hypothetical protein. | Tfp pilus assembly protein tip-associated adhesin PilY1-like. | 0.743 |
EAT11105.1 | EAT13055.1 | RED65_04904 | RED65_15202 | Hypothetical protein. | OmpA-like transmembrane domain protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.606 |
EAT11105.1 | EAT13279.1 | RED65_04904 | RED65_00925 | Hypothetical protein. | Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. | 0.760 |
EAT12007.1 | EAT12009.1 | RED65_11720 | RED65_11730 | COG4719 Uncharacterized protein conserved in bacteria. | COG1360 Flagellar motor protein. | 0.908 |
EAT12007.1 | EAT12976.1 | RED65_11720 | RED65_14807 | COG4719 Uncharacterized protein conserved in bacteria. | Tfp pilus assembly protein tip-associated adhesin PilY1-like. | 0.714 |
EAT12007.1 | EAT13055.1 | RED65_11720 | RED65_15202 | COG4719 Uncharacterized protein conserved in bacteria. | OmpA-like transmembrane domain protein; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.576 |
EAT12007.1 | EAT13812.1 | RED65_11720 | RED65_10479 | COG4719 Uncharacterized protein conserved in bacteria. | GluG; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.713 |
EAT12007.1 | EAT13870.1 | RED65_11720 | RED65_10769 | COG4719 Uncharacterized protein conserved in bacteria. | GluG; COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.709 |
EAT12007.1 | FliD | RED65_11720 | RED65_06573 | COG4719 Uncharacterized protein conserved in bacteria. | COG1345 Flagellar capping protein. | 0.590 |
EAT12009.1 | EAT10774.1 | RED65_11730 | RED65_03175 | COG1360 Flagellar motor protein. | COG4206 Outer membrane cobalamin receptor protein. | 0.419 |
EAT12009.1 | EAT12007.1 | RED65_11730 | RED65_11720 | COG1360 Flagellar motor protein. | COG4719 Uncharacterized protein conserved in bacteria. | 0.908 |
EAT12009.1 | EAT12976.1 | RED65_11730 | RED65_14807 | COG1360 Flagellar motor protein. | Tfp pilus assembly protein tip-associated adhesin PilY1-like. | 0.703 |
page 1 of 4