node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HflK | hflX | RED65_15658 | RED65_15663 | HflK protein; HflC and HflK could encode or regulate a protease. | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.936 |
HflK | hfq | RED65_15658 | RED65_15668 | HflK protein; HflC and HflK could encode or regulate a protease. | Uncharacterized host factor I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.871 |
RplM | hflX | RED65_05129 | RED65_15663 | COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.882 |
RplM | rplC | RED65_05129 | RED65_14182 | COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.999 |
RplM | rplD | RED65_05129 | RED65_14177 | COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | Ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.997 |
RplM | rplK | RED65_05129 | RED65_15593 | COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.997 |
RplM | rplR | RED65_05129 | RED65_14102 | COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
RplM | rplS | RED65_05129 | RED65_05124 | COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.997 |
RplM | rplX | RED65_05129 | RED65_14127 | COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.997 |
RplM | rpmF | RED65_05129 | RED65_01160 | COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.994 |
hflX | HflK | RED65_15663 | RED65_15658 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.936 |
hflX | RplM | RED65_15663 | RED65_05129 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | COG0102 Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. | 0.882 |
hflX | hfq | RED65_15663 | RED65_15668 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Uncharacterized host factor I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.942 |
hflX | rplC | RED65_15663 | RED65_14182 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.887 |
hflX | rplD | RED65_15663 | RED65_14177 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.884 |
hflX | rplK | RED65_15663 | RED65_15593 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.898 |
hflX | rplR | RED65_15663 | RED65_14102 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.885 |
hflX | rplS | RED65_15663 | RED65_05124 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.880 |
hflX | rplX | RED65_15663 | RED65_14127 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.889 |
hflX | rpmF | RED65_15663 | RED65_01160 | Probable GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.887 |