STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ModBMolybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (228 aa)    
Predicted Functional Partners:
ModA
Molybdenum ABC transporter, substrate binding periplasmic protein (ModA); COG0725 ABC-type molybdate transport system, periplasmic component.
 
 0.999
EAT12488.1
Molybdenum ABC transporter, ATP-binding protein; COG4148 ABC-type molybdate transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.999
ModF
ABC molybdenum transporter, ATP-binding subunit modF; COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA.
    
  0.911
EAT13205.1
ABC transporter-like protein; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
    
 0.910
EAT11932.1
iron(III) ABC transporter, ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
 0.906
EAT12111.1
COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component.
 
      0.889
ChoV
COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
 
    
 0.806
EAT12466.1
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  
 0.805
EAT11720.1
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
    
 0.793
potA
Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 0.729
Your Current Organism:
Bermanella marisrubri
NCBI taxonomy Id: 207949
Other names: B. marisrubri, Bermanella marisrubri Pinhassi et al. 2009, CCUG 52064, CECT 7074, Oceanobacter sp. RED65, strain RED65
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