STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60328.1Hypothetical protein; COG0790 FOG: TPR repeat, SEL1 subfamily. (265 aa)    
Predicted Functional Partners:
EAR62458.1
COG0464 ATPases of the AAA+ class.
   
 0.889
EAR63086.1
COG1558 Flagellar basal body rod protein.
   
   0.793
EAR60962.1
COG0506 Proline dehydrogenase.
    
  0.728
EAR62768.1
COG0506 Proline dehydrogenase.
    
  0.728
mnmG
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.647
EAR59994.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
   
 0.604
EAR62000.1
COG0642 Signal transduction histidine kinase.
   
 0.551
EAR60585.1
Two-component system sensor protein; COG0591 Na+/proline symporter.
   
 0.526
EAR59691.1
PAS:GGDEF protein; COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
    
 0.506
EAR62118.1
Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
    
 0.503
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.