STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psdCOG0688 Phosphatidylserine decarboxylase. (297 aa)    
Predicted Functional Partners:
EAR60345.1
COG2897 Rhodanese-related sulfurtransferase.
 
  
 0.980
EAR61372.1
COG1183 Phosphatidylserine synthase.
 
 
 0.979
EAR59637.1
Putative sodium/alanine symporter; COG1115 Na+/alanine symporter.
      0.900
EAR59755.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
      0.898
EAR62334.1
Amino acid/cation symporter; COG1115 Na+/alanine symporter.
      0.883
EAR59690.1
COG0558 Phosphatidylglycerophosphate synthase.
 
 
 0.869
EAR62242.1
2-acyl-glycerophospho-ethanolamine acyltransferase; COG0477 Permeases of the major facilitator superfamily.
    
 0.848
EAR60933.1
Phospholipase family protein; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
   
 0.735
EAR60346.1
Hypothetical protein; COG1639 Predicted signal transduction protein.
     
 0.647
EAR60348.1
COG1949 Oligoribonuclease (3'->5' exoribonuclease).
 
     0.643
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.