STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR59655.1Putative hesB family protein. (108 aa)    
Predicted Functional Partners:
hscB
Co-chaperone HscB; COG1076 DnaJ-domain-containing proteins 1.
 
 0.996
EAR59658.1
Ferredoxin, 2Fe-2S type; COG0633 Ferredoxin.
 
 
 0.987
EAR59654.1
FeS cluster assembly scaffold IscU; COG0822 NifU homolog involved in Fe-S cluster formation.
  
 0.985
iscS
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
 
  
 0.969
hscA
Chaperone protein HscA; COG0443 Molecular chaperone.
 
 
 0.937
EAR59659.1
COG2975 Uncharacterized protein conserved in bacteria.
 
  
 0.929
EAR59652.1
Transcriptional Regulator, BadM/Rrf2 family protein; COG1959 Predicted transcriptional regulator.
  
  
 0.919
EAR61247.1
COG0520 Selenocysteine lyase.
  
 
 0.757
grxD
COG0278 Glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.703
EAR60343.1
Aminomethyl transferase, putative; COG0354 Predicted aminomethyltransferase related to GcvT.
 
 
 0.687
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.