STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR59666.1PQQ enzyme repeat domain protein; COG1520 FOG: WD40-like repeat. (383 aa)    
Predicted Functional Partners:
bamA
Probable outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
 
 0.986
EAR61466.1
Competence lipoprotein ComL, putative; COG4105 DNA uptake lipoprotein.
 
 
 0.977
EAR59665.1
COG2976 Uncharacterized protein conserved in bacteria.
 
    0.974
EAR62913.1
Outer membrane lipoprotein OmlA; COG2913 Small protein A (tmRNA-binding).
  
 
 
 0.963
surA
Peptidyl-prolyl cis-trans isomerase SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.
  
 
 0.960
EAR59887.1
COG3317 Uncharacterized lipoprotein.
  
 
 0.950
EAR59664.1
COG0124 Histidyl-tRNA synthetase.
  
    0.837
engA
GTP-binding protein EngA; COG1160 Predicted GTPases.
 
  
 0.781
EAR59663.1
COG1426 Uncharacterized protein conserved in bacteria.
 
     0.688
EAR60364.1
COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
 
   0.670
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.