STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60402.1COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain. (494 aa)    
Predicted Functional Partners:
EAR61545.1
COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
 0.976
EAR62000.1
COG0642 Signal transduction histidine kinase.
0.964
EAR59845.1
Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); COG2199 FOG: GGDEF domain.
 0.957
EAR60945.1
PAS:GGDEF protein; COG2199 FOG: GGDEF domain.
 0.953
EAR61560.1
COG0642 Signal transduction histidine kinase.
 0.950
EAR62734.1
Sensory box/GGDEF domain protein; COG2199 FOG: GGDEF domain.
  0.926
EAR63026.1
GGDEF protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
0.917
EAR61283.1
Histidine kinase response regulator hybrid protein; COG2203 FOG: GAF domain.
 0.917
EAR59994.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
 
 0.891
EAR61224.1
PAS:GGDEF protein; COG2199 FOG: GGDEF domain.
 0.884
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.