STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60417.1Hypothetical protein; COG3351 Putative archaeal flagellar protein D/E. (487 aa)    
Predicted Functional Partners:
EAR60416.1
COG3034 Uncharacterized protein conserved in bacteria.
 
     0.922
EAR61397.1
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase.
    
  0.756
EAR60862.1
Adenylate cyclase 1 protein; COG0840 Methyl-accepting chemotaxis protein.
    
  0.705
EAR61596.1
PAS protein; COG0840 Methyl-accepting chemotaxis protein.
    
  0.695
EAR62374.1
COG5212 Low-affinity cAMP phosphodiesterase.
  
     0.643
EAR60031.1
COG2866 Predicted carboxypeptidase.
 
     0.573
EAR60036.1
Peptidase M23B; COG4942 Membrane-bound metallopeptidase.
 
 
   0.552
EAR63065.1
Peptidase M23B; COG0739 Membrane proteins related to metalloendopeptidases.
 
 
   0.551
EAR60406.1
Hypothetical protein; COG0541 Signal recognition particle GTPase.
   
   0.546
EAR60955.1
Membrane protein, putative; COG0591 Na+/proline symporter.
   
 
 0.519
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.