STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60924.1Hypothetical protein; COG0419 ATPase involved in DNA repair. (1150 aa)    
Predicted Functional Partners:
EAR60922.1
Hypothetical protein; COG1340 Uncharacterized archaeal coiled-coil protein.
     0.954
EAR60406.1
Hypothetical protein; COG0541 Signal recognition particle GTPase.
  
   0.892
EAR60955.1
Membrane protein, putative; COG0591 Na+/proline symporter.
  
   0.889
EAR60036.1
Peptidase M23B; COG4942 Membrane-bound metallopeptidase.
  
   0.888
EAR63065.1
Peptidase M23B; COG0739 Membrane proteins related to metalloendopeptidases.
  
   0.888
EAR60607.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
   0.888
EAR60923.1
Hypothetical protein; COG0519 GMP synthase, PP-ATPase domain/subunit.
       0.806
EAR60346.1
Hypothetical protein; COG1639 Predicted signal transduction protein.
  
     0.772
EAR62266.1
Hypothetical protein.
  
     0.772
EAR59887.1
COG3317 Uncharacterized lipoprotein.
  
     0.770
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.