STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60280.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
EAR60281.1
Putative iron-sulfur binding protein; COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain.
 
 0.999
EAR60282.1
Cysteine-rich domain protein; COG0247 Fe-S oxidoreductase.
 
 
 0.991
EAR60654.1
FAD linked oxidase; COG0277 FAD/FMN-containing dehydrogenases.
  
 
 0.860
EAR60686.1
Oxidoreductase, FAD/iron-sulfur cluster-binding domain protein; COG0277 FAD/FMN-containing dehydrogenases.
  
 
 0.860
EAR62921.1
Hypothetical protein; COG1145 Ferredoxin.
  
 
 0.749
EAR60400.1
Putative acetate kinase, gene: ACKA OR; COG0282 Acetate kinase.
  
  
 0.677
EAR60401.1
Phosphate acetyltransferase; COG0280 Phosphotransacetylase.
  
  
 0.642
EAR60991.1
Putative oxidoreductase protein; COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
    
   0.555
EAR61047.1
Rod shape-determining protein MreB; COG1077 Actin-like ATPase involved in cell morphogenesis.
    
   0.555
EAR60283.1
Pyruvate dehydrogenase complex repressor; COG2186 Transcriptional regulators.
     
 0.543
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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