STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60292.1Hypothetical protein; COG0789 Predicted transcriptional regulators. (117 aa)    
Predicted Functional Partners:
ihfA
Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
  
  
 0.964
EAR59994.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
  
 0.859
EAR59639.1
COG0049 Ribosomal protein S7.
   
    0.831
EAR61412.1
Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1.
    
 0.816
rpoB
COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit.
    
 
 0.802
EAR61485.1
COG0261 Ribosomal protein L21.
   
    0.799
pheT
phenylalanyl-tRNA synthetase beta subunit; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.777
EAR59641.1
COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.
  
 
   0.776
EAR62918.1
COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
  
 
 0.776
EAR60631.1
COG2214 DnaJ-class molecular chaperone.
  
 
 0.776
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.