STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR59948.1Hypothetical protein; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. (460 aa)    
Predicted Functional Partners:
EAR60303.1
Agmatinase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family.
  
 
  0.842
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
 
  
 0.834
EAR59966.1
COG0174 Glutamine synthetase.
  
  0.787
EAR61412.1
Glutamate synthase large chain precursor; COG0067 Glutamate synthase domain 1.
     
 0.761
EAR60185.1
COG0160 4-aminobutyrate aminotransferase and related aminotransferases.
 
 
 
0.751
EAR59950.1
COG0174 Glutamine synthetase.
  
  0.740
EAR62950.1
COG0460 Homoserine dehydrogenase.
    
 0.737
EAR61756.1
COG0136 Aspartate-semialdehyde dehydrogenase.
    
 0.735
EAR61757.1
COG0136 Aspartate-semialdehyde dehydrogenase.
    
 0.733
EAR60150.1
COG0019 Diaminopimelate decarboxylase.
     
 0.727
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.