STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61697.1Hypothetical protein; COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides. (93 aa)    
Predicted Functional Partners:
oadG
Putative oxaloacetate decarboxylase subunit gamma; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.
  
     0.596
EAR61698.1
COG0425 Predicted redox protein, regulator of disulfide bond formation.
       0.549
EAR62142.1
Hypothetical protein.
  
     0.529
EAR59825.1
Hypothetical protein.
  
     0.498
EAR59609.1
Putative orphan protein; COG0419 ATPase involved in DNA repair.
  
     0.491
EAR59841.1
COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
  
     0.471
rmf
Putative ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family.
  
     0.470
EAR61440.1
Hypothetical protein; COG2267 Lysophospholipase.
  
  
  0.439
EAR59852.1
Cl- channel, voltage gated; COG0038 Chloride channel protein EriC.
  
    0.414
EAR61361.1
Hypothetical protein.
  
     0.410
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.