STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61733.1Patatin; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily. (297 aa)    
Predicted Functional Partners:
EAR61731.1
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
    
  0.768
EAR61732.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
     
 0.758
EAR62242.1
2-acyl-glycerophospho-ethanolamine acyltransferase; COG0477 Permeases of the major facilitator superfamily.
    
  0.701
EAR61730.1
Probable transcriptional regulator SyrB; COG3307 Lipid A core - O-antigen ligase and related enzymes.
       0.476
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.