STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61743.1COG4597 ABC-type amino acid transport system, permease component. (393 aa)    
Predicted Functional Partners:
EAR61742.1
COG0765 ABC-type amino acid transport system, permease component.
 
0.999
EAR61744.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
  0.996
EAR62728.1
COG0765 ABC-type amino acid transport system, permease component.
 
0.984
EAR61741.1
General L-amino acid transport ATP-binding protein AapP; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.980
EAR62730.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
  0.934
EAR62727.1
General L-amino acid transport ATP-binding protein AapP; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.932
EAR62780.1
Putative amino acid ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.833
EAR62778.1
Hypothetical protein; COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.769
EAR62779.1
Hypothetical protein; COG0765 ABC-type amino acid transport system, permease component.
 
0.694
EAR60482.1
Probable periplasmic binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 
 
  0.550
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.