STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61745.1COG0421 Spermidine synthase. (289 aa)    
Predicted Functional Partners:
EAR61749.1
S-adenosylmethionine decarboxylase, proenzyme; COG1586 S-adenosylmethionine decarboxylase.
 
 
 0.996
EAR60572.1
Flagellar motor switch protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.897
EAR60150.1
COG0019 Diaminopimelate decarboxylase.
 
 0.887
EAR60303.1
Agmatinase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family.
  
 
 0.865
EAR59682.1
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; COG0775 Nucleoside phosphorylase.
    
 0.803
EAR61053.1
Putative carbon-nitrogen hydrolase; COG0388 Predicted amidohydrolase.
 
 
 0.798
EAR62845.1
COG0005 Purine nucleoside phosphorylase.
  
 
 0.657
EAR62890.1
COG0192 S-adenosylmethionine synthetase.
  
 
 0.567
EAR61746.1
COG0477 Permeases of the major facilitator superfamily.
       0.534
EAR61792.1
Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
 
 0.515
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.