STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61151.1ABC transporter, ATP-binding protein; COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component. (229 aa)    
Predicted Functional Partners:
EAR61152.1
Permease, putative; COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component.
 
     0.896
EAR60480.1
Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; COG4160 ABC-type arginine/histidine transport system, permease component.
 
      0.811
EAR61150.1
acyl-CoA thioesterase I precursor; COG2755 Lysophospholipase L1 and related esterases.
 
     0.801
EAR61867.1
Nitrate transporter, putative; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
      0.767
EAR61865.1
COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
      0.687
EAR61506.1
COG0100 Ribosomal protein S11.
  
     0.663
EAR59467.1
COG0094 Ribosomal protein L5.
  
     0.645
tsaD
Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
     0.635
modB
COG4149 ABC-type molybdate transport system, permease component.
 
      0.604
EAR62181.1
COG0492 Thioredoxin reductase.
  
     0.500
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.