STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR61210.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
EAR61211.1
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
  
  
 0.906
EAR61212.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 0.906
EAR61215.1
Putative MSHA biogenesis protein MshL; COG1450 Type II secretory pathway, component PulD.
  
  
 0.737
EAR61214.1
Putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshM (pilus type IV); COG3267 Type II secretory pathway, component ExeA (predicted ATPase).
       0.727
EAR61213.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
  
 0.723
EAR61218.1
Hypothetical protein.
  
  
 0.722
EAR61217.1
MSHA biogenesis protein MshJ; COG0845 Membrane-fusion protein.
  
  
 0.720
EAR61219.1
COG4972 Tfp pilus assembly protein, ATPase PilM.
  
  
 0.716
EAR61216.1
Hypothetical protein.
       0.685
EAR62373.1
Bacterial type II secretion system protein E:GAF domain; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 0.671
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.