STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62487.1Twin-arginine translocation protein TatB; COG1826 Sec-independent protein secretion pathway components. (124 aa)    
Predicted Functional Partners:
tatC
Transport protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
 
 
 0.999
tatA
Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
 0.999
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
  
    0.902
EAR60644.1
COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
   
 
 0.772
EAR60649.1
COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
   
 
 0.772
EAR59840.1
COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
   
 
 0.772
hisE
COG0140 Phosphoribosyl-ATP pyrophosphohydrolase.
  
    0.745
EAR61180.1
Hypothetical protein; COG1580 Flagellar basal body-associated protein.
  
 
 
 0.655
EAR62489.1
HIT domain protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.
  
    0.651
EAR60573.1
Flagellar protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 
 0.632
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.