STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62629.1COG4704 Uncharacterized protein conserved in bacteria. (140 aa)    
Predicted Functional Partners:
EAR62631.1
Hypothetical protein; COG3000 Sterol desaturase.
       0.784
EAR62630.1
Hypothetical protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
       0.773
EAR62632.1
Hypothetical protein.
       0.752
EAR62633.1
Hypothetical protein.
       0.752
EAR62634.1
Transcriptional regulatory protein; COG3226 Uncharacterized protein conserved in bacteria.
       0.736
EAR62843.1
COG3222 Uncharacterized protein conserved in bacteria.
  
     0.595
EAR62635.1
COG3124 Uncharacterized protein conserved in bacteria.
 
     0.580
EAR62636.1
Hypothetical protein.
 
     0.498
EAR62637.1
Hypothetical protein; COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
 
     0.482
EAR62628.1
Signaling protein (CHEY,EAL,GGDEF domains); COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
       0.470
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.