STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62639.1Putative sugar ABC transporter, periplasmic solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component. (447 aa)    
Predicted Functional Partners:
EAR62638.1
Histidine kinase; COG0840 Methyl-accepting chemotaxis protein.
       0.773
EAR62640.1
Multisensor diguanylate cyclase/phophodiesterase; COG2199 FOG: GGDEF domain.
       0.488
EAR59994.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
  
 
 0.475
EAR61099.1
COG1654 Biotin operon repressor.
     
 0.464
EAR62342.1
Serine/threonine kinase with two-component sensor domain; COG3899 Predicted ATPase.
  
 
 0.415
holB
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
    
  0.403
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.