STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62668.1Possible ABC transporter, permease protein precursor; COG4177 ABC-type branched-chain amino acid transport system, permease component. (308 aa)    
Predicted Functional Partners:
EAR62667.1
Probable transmembrane ABC transporter protein; COG0559 Branched-chain amino acid ABC-type transport system, permease components.
 
 0.999
EAR62664.1
ATP-binding ABC transporter protein; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.997
EAR62665.1
ABC transporter subunit; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.997
EAR61597.1
ABC transporter related; COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.996
EAR61598.1
ABC transporter subunit; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.996
EAR61600.1
Probable transmembrane ABC transporter protein; COG0559 Branched-chain amino acid ABC-type transport system, permease components.
 
 0.995
livG
COG0411 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.991
livF
COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; Belongs to the ABC transporter superfamily.
 
 0.990
EAR61335.1
Putative branched-chain amino acid transport protein (ABC superfamily, ATP_bind); COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
 
 0.984
EAR62666.1
Hypothetical protein; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
 0.977
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.