STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62688.1COG0583 Transcriptional regulator. (293 aa)    
Predicted Functional Partners:
EAR60174.1
COG0583 Transcriptional regulator.
  
     0.773
EAR62815.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.760
EAR60298.1
Putative transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.758
EAR60677.1
COG0583 Transcriptional regulator.
  
     0.747
EAR60682.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.723
EAR61352.1
Glycine cleavage system transcription activator; COG0583 Transcriptional regulator.
  
     0.721
EAR61739.1
COG0583 Transcriptional regulator.
  
     0.715
EAR59578.1
Transcriptional Regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.709
EAR62689.1
COG4125 Predicted membrane protein.
 
     0.658
EAR61654.1
Putative transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.488
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.