STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62694.1COG3634 Alkyl hydroperoxide reductase, large subunit. (521 aa)    
Predicted Functional Partners:
EAR62693.1
Alkyl hydroperoxide reductase, C subunit; COG0450 Peroxiredoxin.
 
  
 0.984
EAR60262.1
Antioxidant, AhpC/Tsa family protein; COG0450 Peroxiredoxin.
  
  
 0.870
EAR62181.1
COG0492 Thioredoxin reductase.
 
 
0.797
EAR62695.1
Inosine monophosphate dehydrogenase-related protein; COG0517 FOG: CBS domain.
       0.701
EAR61149.1
COG0605 Superoxide dismutase.
  
  
 0.581
EAR61247.1
COG0520 Selenocysteine lyase.
   
 
  0.572
EAR61132.1
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 0.557
EAR60622.1
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.461
msrB-2
Bifunctional methionine sulfoxide reductase A/B protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.458
EAR61399.1
Riboflavin biosynthesis protein RibD; COG0117 Pyrimidine deaminase.
      
 0.426
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.