STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62774.1Periplasmic protein cpxP, putative; COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein. (173 aa)    
Predicted Functional Partners:
EAR62000.1
COG0642 Signal transduction histidine kinase.
    
 0.762
EAR61545.1
COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
    
 0.734
EAR61560.1
COG0642 Signal transduction histidine kinase.
    
 0.723
EAR60243.1
COG0642 Signal transduction histidine kinase.
    
 0.723
EAR59994.1
Serine/threonine kinase with two-component sensor domain; COG0642 Signal transduction histidine kinase.
    
 0.708
EAR60585.1
Two-component system sensor protein; COG0591 Na+/proline symporter.
    
 0.692
EAR62118.1
Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
     
 0.688
EAR62120.1
Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
     
 0.688
EAR62776.1
Probable two-component sensor; COG0642 Signal transduction histidine kinase.
  
    0.609
EAR62775.1
Transcriptional regulatory protein CpxR; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.560
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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