STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62804.1Hypothetical protein; COG0419 ATPase involved in DNA repair. (358 aa)    
Predicted Functional Partners:
EAR62439.1
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; COG2895 GTPases - Sulfate adenylate transferase subunit 1.
  
  
 0.894
EAR60511.1
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; COG2895 GTPases - Sulfate adenylate transferase subunit 1.
  
  
 0.894
EAR61801.1
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.
    
 0.854
EAR62950.1
COG0460 Homoserine dehydrogenase.
  
 0.825
EAR61768.1
O-succinylhomoserine sulfhydrylase; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
  
 0.811
EAR62919.1
COG1045 Serine acetyltransferase.
  
 0.806
EAR60532.1
WbbJ protein; COG0110 Acetyltransferase (isoleucine patch superfamily).
  
 0.806
EAR61491.1
COG1977 Molybdopterin converting factor, small subunit.
  
 0.773
EAR60220.1
Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like); COG3830 ACT domain-containing protein.
    
 0.755
EAR62073.1
Iron-sulfur cluster-binding protein; COG1145 Ferredoxin.
  
 
  0.718
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.