STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62884.1Holliday junction resolvase-like protein; COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis). (158 aa)    
Predicted Functional Partners:
EAR62885.1
Hypothetical protein; COG1678 Putative transcriptional regulator.
  
  
 0.937
EAR62882.1
COG0540 Aspartate carbamoyltransferase, catalytic chain.
  
    0.844
EAR62883.1
COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase.
  
    0.830
EAR62881.1
Dihydroorotase, multifunctional complex type; COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
    0.820
EAR62887.1
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
  
 0.802
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.691
EAR60360.1
COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase.
  
    0.629
EAR62886.1
TonB-like; COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
    0.539
EAR62888.1
COG1385 Uncharacterized protein conserved in bacteria.
     
 0.519
EAR62753.1
Coenzyme A biosynthesis protein:Cytidyltransferase-related; COG0669 Phosphopantetheine adenylyltransferase.
 
   
 0.419
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.