STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR62919.1COG1045 Serine acetyltransferase. (268 aa)    
Predicted Functional Partners:
EAR60388.1
COG0031 Cysteine synthase.
 
 0.994
cysK
COG0031 Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.991
EAR61222.1
Cysteinyl-tRNA synthetase, class Ia; COG0215 Cysteinyl-tRNA synthetase.
 
 
 0.981
EAR61873.1
Putative cysteine synthase/cystathionine (CysK); COG0031 Cysteine synthase.
  
 0.946
EAR60220.1
Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like); COG3830 ACT domain-containing protein.
    
 0.940
EAR60070.1
Teichoic acid biosynthesis protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.929
EAR61762.1
COG0159 Tryptophan synthase alpha chain.
     
 0.904
EAR61163.1
COG1171 Threonine dehydratase.
    
 0.903
EAR61372.1
COG1183 Phosphatidylserine synthase.
    
  0.900
EAR60109.1
L-serine dehydratase, iron-sulfur-dependent, single chain form; COG1760 L-serine deaminase.
     
 0.866
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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