STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR63014.1Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis. (408 aa)    
Predicted Functional Partners:
EAR63013.1
Putative sucrose phosphorylase; COG0366 Glycosidases.
   
 0.993
EAR61048.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
 
 0.955
EAR63015.1
HAD-superfamily hydrolase, subfamily IIB; COG3769 Predicted hydrolase (HAD superfamily).
 
     0.941
EAR59663.1
COG1426 Uncharacterized protein conserved in bacteria.
  
 
 0.940
EAR61911.1
Hypothetical protein.
 
 
 0.686
tuf
Elongation factor Tu; COG0050 GTPases - translation elongation factors.
    
 
 0.614
EAR62308.1
COG0050 GTPases - translation elongation factors.
    
 
 0.614
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.611
ftsZ-2
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.611
EAR62986.1
Rare lipoprotein A; COG0797 Lipoproteins.
   
 
 0.601
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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