STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR63086.1COG1558 Flagellar basal body rod protein. (145 aa)    
Predicted Functional Partners:
EAR63085.1
Flagellar basal-body rod protein FlgB; COG1815 Flagellar basal body protein.
 
 
 0.999
EAR63087.1
Basal-body rod modification protein FlgD; COG1843 Flagellar hook capping protein.
 
 
 0.999
EAR63088.1
COG1749 Flagellar hook protein FlgE.
 
 0.999
EAR63089.1
COG4787 Flagellar basal body rod protein.
 
 
 0.999
EAR63090.1
COG4786 Flagellar basal body rod protein.
 
 0.999
EAR63091.1
COG2063 Flagellar basal body L-ring protein.
 
 
 0.998
EAR63092.1
COG1706 Flagellar basal-body P-ring protein.
 
 
 0.998
EAR60579.1
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.998
fliQ
Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.997
fliE
COG1677 Flagellar hook-basal body protein.
 
 
 0.997
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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