STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR63109.1Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein. (221 aa)    
Predicted Functional Partners:
EAR63087.1
Basal-body rod modification protein FlgD; COG1843 Flagellar hook capping protein.
   
   0.740
EAR63110.1
Hypothetical protein.
       0.664
EAR61397.1
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase; COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase.
   
   0.542
EAR63111.1
Hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.496
EAR63113.1
Transcription regulator, TetR family protein; COG1309 Transcriptional regulator.
       0.496
EAR62989.1
Hypothetical protein.
    
   0.426
EAR60083.1
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
    0.408
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.