STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR59779.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
EAR59778.1
Hypothetical protein.
       0.773
EAR59780.1
RRNA (guanine-N1-)-methyltransferase, putative; COG0500 SAM-dependent methyltransferases.
       0.773
EAR59781.1
COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.773
EAR59782.1
COG2171 Tetrahydrodipicolinate N-succinyltransferase.
       0.518
EAR59783.1
COG1393 Arsenate reductase and related proteins, glutaredoxin family.
       0.464
EAR59784.1
Hypothetical protein; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
       0.456
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.