STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR60122.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (203 aa)    
Predicted Functional Partners:
EAR61181.1
COG3160 Regulator of sigma D.
  
     0.723
EAR61443.1
Hypothetical protein; COG2906 Bacterioferritin-associated ferredoxin.
  
     0.573
EAR59838.1
COG3139 Uncharacterized protein conserved in bacteria.
  
     0.541
EAR62971.1
COG3151 Uncharacterized protein conserved in bacteria.
  
     0.539
EAR61370.1
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
    0.521
EAR60408.1
Hypothetical protein.
   
    0.505
EAR60121.1
COG0251 Putative translation initiation inhibitor, yjgF family.
       0.418
Your Current Organism:
Neptuniibacter caesariensis
NCBI taxonomy Id: 207954
Other names: CCUG 52065, CECT 7075, N. caesariensis, Neptuniibacter caesariensis Arahal et al. 2007, Oceanospirillum sp. MED92, strain MED92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.