Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR60123.1 | EAR60124.1 | MED92_08707 | MED92_08712 | GGDEF protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. | COG3146 Uncharacterized protein conserved in bacteria. | 0.468 |
EAR60124.1 | EAR60123.1 | MED92_08712 | MED92_08707 | COG3146 Uncharacterized protein conserved in bacteria. | GGDEF protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain. | 0.468 |
EAR60124.1 | EAR60125.1 | MED92_08712 | MED92_08717 | COG3146 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases. | 0.572 |
EAR60124.1 | EAR62183.1 | MED92_08712 | MED92_10769 | COG3146 Uncharacterized protein conserved in bacteria. | arginine-tRNA-protein transferase-related protein; COG2935 Putative arginyl-tRNA:protein arginylyltransferase. | 0.428 |
EAR60125.1 | EAR60124.1 | MED92_08717 | MED92_08712 | Hypothetical protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases. | COG3146 Uncharacterized protein conserved in bacteria. | 0.572 |
EAR62183.1 | EAR60124.1 | MED92_10769 | MED92_08712 | arginine-tRNA-protein transferase-related protein; COG2935 Putative arginyl-tRNA:protein arginylyltransferase. | COG3146 Uncharacterized protein conserved in bacteria. | 0.428 |